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SRX22985825: TraDIS of E. coli strain MS69-1
1 ILLUMINA (Illumina NovaSeq 6000) run: 7.6M spots, 2.3G bases, 663.8Mb downloads

Design: TruSeq-TruSeq
Submitted by: University of Illinois at Chicago
Study: E. coli TraDIS
show Abstracthide Abstract
We conducted Transposon Directed Insertion-Site Sequencing (TraDIS) on three different strains of Escherichia coli. We determined the number of unique mutants: 1) as a function of recovery time after electroporation (0.5, 1 or 2 hrs); and 2) as a function of selection medium (agar plates or liquid broth). For the recovery analysis, we also compared the recovery of transposon-DNA junctions based on the layout of sequencing library fragments (Nextera-TruSeq hybrid, or TruSeq-TruSeq).
Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 69-1
SAMN00189184 • SRS150866 • All experiments • All runs
Library:
Name: HM347-0.5h-Tru
Instrument: Illumina NovaSeq 6000
Strategy: Tn-Seq
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 7.6M spots, 2.3G bases, 663.8Mb
Run# of Spots# of BasesSizePublished
SRR273085307,589,3042.3G663.8Mb2024-03-21

ID:
31057244

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